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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LYK2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSVSKQYM TSLVVILLFI SLSSLSPTST SHSCDPVEEE EEASSFGYVC HSNLQKCHTF  60
   61 AILRAKPPFY SLSDLSRHLG LDADDEYVPK GQLLLIPIEC RCNGSIYEAS LIKNCVKGDT 120
  121 FRSVSQSLQG LTTCLSIREK NPHISEDKLG DNIKLRLAIR CSCPQEGVSN ASFLVTYPVG 180
  181 VRDSVSSLAV RFNTTEDAIV SANNKSGVVP LKPALIPLDH KPEKQGSRKR NPSKKKRSKM 240
  241 KLMIAVSSAI AGVCGLVTLM VFGYLHWKKE TQIQTQTQKW ISNKDPETRQ LSLSIRTTSD 300
  301 KKISFEGSQD GSILDSHNTV GTTTPRKPVL EIYAFEELEK ATENFSSSNH IKGSVYFGSL 360
  361 KGKDLAIKQV NADEMKRFDF GLLNDQSHYY NHNVIRVLGT CFREIDQDSY LVFEYARNGS 420
  421 LWDWIQNKLA IKNQFIESCY CFLAWKQRIK ICHDVAIALK YMHRINYVHG NIKSRNIFLN 480
  481 EDLRGKVGNF GMSKCVTNEL ATEENLIESS LSPASDIFAY GIIVMEVLSG QTPDMLLGLQ 540
  541 EVETTSLGTQ ETFVSEWSRL RRLLGDKEKL REVMDSTLGE SYSVDSAFEI ASIARDCTAE 600
  601 EAESRPSAVE IAERVSRLVD DDEDEEDEAV IDRESTLISE SSYKPLVKKS SIID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle