YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15231699, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVKILPSSS SASSSLVFIM SLFFLLLSLI VPSSVLSATL RSDIQALESI IRSVDPSSIS  60
   61 PSSYLSTWDF SEDPCEGSGT FLGVMCSFPL ENTTSRVIEI DLDDDGYDGF LSDEVGNLTE 120
  121 LTVLSLNKNR FRGPVPESVF QLRKLTKLSL AENFFTGDIP AEITRLKELK TIDLSKNSIA 180
  181 GEIPPRISAL RSLTHLVLSN NHLDGRIPAL NGLWKLQVLE LGNNHLYGML PKLPPSLRTL 240
  241 SLCFNSLAGR ISPLHRLKQL VSLDVSQNRF SGTVGHEILT FPEIARINVS FNQFISIEVI 300
  301 KVTGSRLRML DAEGNHLQGH LPLNLATYEN LKDINLRSNM FSGDIPRIYG KRLENSWRSL 360
  361 YLENNYLSGI LPEEFQKITK QIRGNLSNNC LQCPKNVQIC QGTQKPKSQC TNAMLGSLE

Type	Start	End	Confidence
Signal Peptide	1	37	0.99
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	419	0.99