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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7485159, gi|2...
Protein type: Transmembrane
Type Confidence: 0.52
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTTHLVGYL NIFILHFLLC LLRHMLSVGQ QLLQKDAPQS IHRFGFHQPP FNSVDHLHLH  60
   61 CFALPYVPSS GEEDRLEPFL LVATNQRIDF IFFAVKLQSC NKRHSQVSNL SDYLISLSVG 120
  121 SSSSAVSLYL DTGSDLVWFP CRPFTCILCE SKPLPPSPPS SLSSSATTVS CSSPSCSAAH 180
  181 SSLPSSDLCA ISNCPLDFIE TGDCNTSSYP CPPFYYAYGD GSLVAKLYSD SLSLPSVSVS 240
  241 NFTFGCAHTT LAEPIGVAGF GRGRLSLPAQ LAVHSPHLGN SFSYCLVSHS FDSDRVRRPS 300
  301 PLILGRFVDK KEKRVGTTDD HDDGDDEKKK KNEFVFTEML ENPKHPYFYS VSLQGISIGK 360
  361 RNIPAPAMLR RIDKNGGGGV VVDSGTTFTM LPAKFYNSVV EEFDSRVGRV HERADRVEPS 420
  421 SALVLHFAGN RSSVTLPRRN YFYEFMDGGD GKEEKRKIGC LMLMNGGDES ELRGGTGAIL 480
  481 GNYQQQGFEV VYDLLNRRVG FAKRNLLAIQ SSRIPKLYRR KFVHLNPDGY YATNNPYQVN 540
  541 GPKGFTEFKY LEETHDLFVR LDFPGIQKES VIILLEPSKK AVIVTGEAPK ESKHDSSHRK 600
  601 YGTATGLICD CCEISNIQCF VGDGVVRLIL SKQKINLRVP IFCSCKITNL QNVLFFCLIF 660
  661 VGGARMPTDA SPNIIRGYNP EDLSVELLLE TSLRCFSIVN VSDIFHGFVL LIPIVAVAGG 720
  721 HPLAHLRGLN PEGCRGTDPF DPAFTGPTIR PHPSVLEGST SAYETKQLSN GGLYLRIDMP 780
  781 GVPSDGFIVA VDGNGVVTIM GRAPATMHDS NGFYAMNNPY QANGPKGFAE FNQERDCGYP 840
  841 LTLLEPSKKA VTVTGDAAKS SKHDASNRNN NIHTFVEDGV VRLILSKKKI YPHAPNFCSF 900
  901 GGATIPTGDA PVADGTPYVN LLAHFRGLIP KGRRCTDPGD PAFTGPVVLP HPSVLEGPMM 960
  961 PYETKQLSNG GLYMRVDMPG VPSEKFMVAV DGDGVVTIMG RAPVTMHDTS GRTYVAKVAN1020
 1021 VPRGYDGGRI KLVPKHGVIR LTIPSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle