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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7269654, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQKSVLFSA LGVGVGLGIG LASGQSLGKW ANGSISAEDG LTGEKIEQEL VRQIVDGRES  60
   61 SVTFDEFPYY LSEKTRLLLT SAAYVHLKQS DISKHTRNLA PGSKAILLSG PADTEQVWMR 120
  121 QERTWTLRRH TSGNDLHSRG FDVTSQPPRL KRNASAASDM SSISSRSATS VSASSKRSAN 180
  181 LCFDERLFLQ SLYKVLVSIS ETNPIIIYLR DVEKLCQSER FYKLFQRLLT KLSGPVLVLG 240
  241 SRLLEPEDDC QEVGEGISAL FPYNIEIRPP EDENQLMSWK TRFEDDMKVI QFQDNKNHIA 300
  301 EVLAANDLEC DDLGSICHAD TMFLSSHIEE IVVSAISYHL MNNKEPEYKN GRLVISSNSL 360
  361 SHGLNILQEG QGCFEDSLKL DTNIDSKEVA PDNEFEKRIR PEVIPANEIG VTFADIGSLD 420
  421 ETKESLQELV MLPLRRPDLF KGGLLKPCRG ILLFGPPGTG KTMMAKAIAN EAGASFINVS 480
  481 MSTITSKWFG EDEKNVRALF TLAAKVSPTI IFVDEVDSML GQRTRVGEHE AMRKIKNEFM 540
  541 THWDGLMSNA GDRILVLAAT NRPFDLDEAI IRRFERRIMV GLPSVESREK ILRTLLSKEK 600
  601 TENLDFQELA QMTDGYSGSD LKNFCTTAAY RPVRELIKQE CLKDQERRKR EEAEKNSEEG 660
  661 SEAKEEVSEE RGITLRPLSM EDMKVAKSQV AASFAAEGAG MNELKQWNDL YGEGGSRKKE 720
  721 QLSYFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle