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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP35_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNALWLLC ILVLPAIACG RKPEKKVTIS SSGRKEDDLV TGLPGQPPVN FKHYAGYVNL  60
   61 GPEQKQKALF YWFFEAQQNS SRRPLVLWLN GGPGCSSIAY GAAQELGPFL VHDNGGKLTY 120
  121 NHFSWNKEAN MLFLEAPVGV GFSYTNNSMD LQKLGDEVTA SDSLAFLINW FMKFPEFRSS 180
  181 EFYISGESYA GHYVPQLAEV IYDRNKKVTK DSSINLKGFM IGNAVINEAT DMAGLVDYAW 240
  241 SHAIISDEVH TSIHGSCSFE EDTTNKTEQC YNNFKGFMDA YNDIDIYSIY TPVCLSSLLS 300
  301 SSPRKPKIVV SPRLLTFDDL WDKFPAGYDP CTESYAENYF NRKDVQVALH ANVTNLPYPY 360
  361 SPCSGVIKRW SDAPSTMIPI IQKLLTGGLR IWIYSGDTDG RVPVTSTRYS IKKMGLKVES 420
  421 PWRSWFHKSQ VAGWVETYAG GLNFVTVRGA GHQVPALAPA QSLTLFSHFI SSVPLPSKRF 480
  481 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle