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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PUP1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNGLIIINC IILTIGTCGG PLLTRLYFTN GGKRIWFMSF LSTAGFPIIL IPLLVSFLSR  60
   61 RRSNRNPNNA ENKRKTKLFL METPLFIASI VIGLLTGLDN YLYSYGLAYL PVSTSSLIIG 120
  121 TQLAFNALFA FLLVKQKFTP FSINAVVLLT VGIGILALHS DGDKPAKESK KEYVVGFLMT 180
  181 VVAALLYAFI LPLVELTYKK ARQEITFPLV LEIQMVMCLA ATFFCVIGMF IVGDFKVIAR 240
  241 EAREFKIGGS VFYYALIVIT GIIWQGFFLG AIGIVFCASS LASGVLISVL LPVTEVFAVV 300
  301 CFREKFQAEK GVSLLLSLWG FVSYFYGEFK SGKKVVDKPQ PPETELPILP VSDYVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle