YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15229201, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRNLGSAFR QELANLDKDP DSHKTAMSNL RSIVKDLDAK VVHVFVAQLS DVKEIGLESG  60
   61 GYTVSLFEDL ARAHGVKIAP HIDIIMPAII RTLSSSEGSL RVQQACSRAV AAMARYGIDP 120
  121 TTPEDKKTNV IHSLCKPLSD SLIDSQHQQH LALGSALCLK SLVDCDNWRS ASSEMVNNVC 180
  181 QSLAVALEAT SSEAKSHMAL VMALSKHNPF TVEAYARLFV KSGLRILDLG VVEGDSQKRL 240
  241 LAIQMLNFLM KNLNPKSISS ELELIYQEME KYQKDQHYVK MAAHETMRQA ERLICEADPM 300
  301 FDAENCKPRN SLSGSVKSTS SLREHDGSVY SRQDRSYVND QDEYDVLFSG VASGRTLVSG 360
  361 SPLVTFGDNN QETGFVIESP RIGDQIQCSG VENGNIESVW FHQRNRSSEF NESVCSRTNR 420
  421 SRSSRRNTKK RQSGDICSKH HRHGFAQDPF TELLDNRQQL LQYSETSSSS SIYDTSGTTT 480
  481 PTNTTEDICE KPKTDLDSEA KLKTVETELD PRLGRSKGVL KLGLSVFSIA VAGFASFMWM 540
  541 YLQDDMMPPH LVPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle