YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRK5_ARATH
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNWEDPFTL ACNTALKKNL PSCIFIIIFI SVLCPVAMSQ VVVPDSDADC LLRFKDTLAN  60
   61 GSEFRSWDPL SSPCQGNTAN WFGVLCSNYV WGLQLEGMGL TGKLNLDPLV PMKNLRTISF 120
  121 MNNNFNGPMP QVKRFTSLKS LYLSNNRFSG EIPADAFLGM PLLKKILLAN NAFRGTIPSS 180
  181 LASLPMLLEL RLNGNQFQGQ IPSFQQKDLK LASFENNDLD GPIPESLRNM DPGSFAGNKG 240
  241 LCDAPLSPCS SSSPGVPVVP VSPVDPKSTS PPTGKKAGSF YTLAIILIVI GIILVIIALV 300
  301 FCFVQSRRRN FLSAYPSSAG KERIESYNYH QSTNKNNKPA ESVNHTRRGS MPDPGGRLLF 360
  361 VRDDIQRFDL QDLLRASAEV LGSGTFGASY KAAISSGQTL VVKRYKHMNN VGRDEFHEHM 420
  421 RRLGRLNHPN ILPLVAYYYR REEKLLVTEF MPNSSLASHL HANNSAGLDW ITRLKIIKGV 480
  481 AKGLSYLFDE LPTLTIPHGH MKSSNIVLDD SFEPLLTDYA LRPMMSSEHA HNFMTAYKSP 540
  541 EYRPSKGQII TKKTDVWCFG VLILEVLTGR FPENYLTQGY DSNMSLVTWV NDMVKEKKTG 600
  601 DVFDKEMKGK KNCKAEMINL LKIGLRCCEE EEERRMDMRE VVEMVEMLRE GESEDDFGSM 660
  661 DHRGTHNNVY SSMLLDDDDF GFSMNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle