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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y3288_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYKRKLSLS VVFLFVFYLA AVTSDLESDR RALLAVRNSV RGRPLLWNMS ASSPCNWHGV  60
   61 HCDAGRVTAL RLPGSGLFGS LPIGGIGNLT QLKTLSLRFN SLSGPIPSDF SNLVLLRYLY 120
  121 LQGNAFSGEI PSLLFTLPSI IRINLGENKF SGRIPDNVNS ATRLVTLYLE RNQLSGPIPE 180
  181 ITLPLQQFNV SSNQLNGSIP SSLSSWPRTA FEGNTLCGKP LDTCEAESPN GGDAGGPNTP 240
  241 PEKKDSDKLS AGAIVGIVIG CVVGLLLLLL ILFCLCRKRK KEENVPSRNV EAPVAAATSS 300
  301 AAIPKETVVV VPPAKATGSE SGAVNKDLTF FVKSFGEFDL DGLLKASAEV LGKGTVGSSY 360
  361 KASFEHGLVV AVKRLRDVVV PEKEFRERLH VLGSMSHANL VTLIAYYFSR DEKLLVFEYM 420
  421 SKGSLSAILH GNKGNGRTPL NWETRAGIAL GAARAISYLH SRDGTTSHGN IKSSNILLSD 480
  481 SYEAKVSDYG LAPIISSTSA PNRIDGYRAP EITDARKISQ KADVYSFGVL ILELLTGKSP 540
  541 THQQLNEEGV DLPRWVQSVT EQQTPSDVLD PELTRYQPEG NENIIRLLKI GMSCTAQFPD 600
  601 SRPSMAEVTR LIEEVSHSSG SPNPVSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle