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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP41_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIVSLRDVA MVMVTVQVFA RGYPETDLVV RLPGQPKVVF RQYAGYVDLD LNAGRSLFYY  60
   61 FVEAEKHPDT KPLTLWLNGG PGCSSVGGGA FTELGPFYPT GYGRGLRINS MSWNKASNLL 120
  121 FVDSPAGVGW SYSNRSSDYN AGDKSAASDM LVFLLRWFDK FPELKSHDLF LTGESYAGHY 180
  181 IPQLADAILS YNSRSSGFKF NIKGIAIGNP LLKLDRDIPA VYEFFWSHGM ISEVVGRTIK 240
  241 IQCDFSHYTY AYPHNVSDAC NDAIREAGDI TTEYVNTFDV LPDLCYPSIA LQELRLKQMA 300
  301 TKMSMGVDVC MNYERQFYLN IPEVQMALHA NRTNLPYSWS LCSNLLNYSA IDVNTNMLPT 360
  361 LKRIIQNKIP VRIFSGDQDS VVPFLGTRTI VGELANDLNF KTTVPYGVWF HKRQVGGWAI 420
  421 EYGNLLTFAT VRGAAHAVAY TQPSRALHLF STFLRGQRLP NKTDIAMHD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle