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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DNJ63_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRTRLAISV VLVSTLLLLN VKAKSVDPYK VLGVSKDAKQ REIQKAFHKQ SLKYHPDKNK  60
   61 DKGAQEKFAE INNAYEILSD EEKRKNYDLY GDEKGQPGFD SGFPGGNGGY SYSSSGGGFN 120
  121 FGGPGGWQNM GGGGGSKSFS FSFGGPSESS FGFGMDDIFS MFSGGSSKGK EQFGGFGSSS 180
  181 NAESKSKSST VAAIKTINSQ VYKKDVVDQG MTWLLLSYLP SQRGSQYHES IIEEVAESLQ 240
  241 GALKVGRLNC ETESSLCKQL GIVPRRAPRM FVYSYTSSGK ATLAEYTEEL VAKKVKSFCQ 300
  301 EHLPRFSKKI DLNTFDVSAV SSQKTPKVLL LSTKKDTPVI WRVLSGLYNG RFVFYNTEVH 360
  361 DTSDPKIQKL GVDKFPAIVG WLSNGEKQVL KTGITVKNLK SAVQELGKLL EGLEKKNKKV 420
  421 SSKSQAGQAP NESSEKIPLL SRPNFDSICG ENTPVCIIGA FRSSNGKEKL QSIMSKVSQK 480
  481 SLSRRQASTT GSQDTVSYSL LDATKQSAFL SSLDKSEFKT SSDKLLIAYK PRRGKFATFK 540
  541 GDMTIEEVEK FVAAVLNGDI QFTKTRQKPQ IK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle