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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PAO5_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKARIVII GAGMAGLTAA NKLYTSSNNT FELSVVEGGS RIGGRINTSE FSSEKIEMGA  60
   61 TWIHGIGGSP VYRIAKETGS LVSDEPWECM DSTIDKAKTF AEGGFEIEPS IVESISGLFT 120
  121 ALMELAQGKE ISQSDADLSR LAHIYETATR VCSKGSSTSV GSFLKSGFDA YWDSISNGGE 180
  181 EGVKGYGKWS RKSLEEAIFT MFSNTQRTYT SADELSTLDF AAESEYQMFP GEEITIAKGY 240
  241 LSVIHHLASV LPQGVIQLNR KVTKIEWQSN EVKLHFSDGS VVFADHVIVT VSLGVLKAGI 300
  301 ETDAELFSPP LPDFKSDAIR RLGYGVVNKL FVEMSQRKFP SLQLVFDRED SEFRFVKIPW 360
  361 WMRRTATITP IHSNSKVLLS WFAGKEALEL EKLTDEEIKD AVMTTISCLT GKEVKNDTAK 420
  421 PLTNGSLNDD DEAMKITKVL KSKWGSDPLF RGSYSYVAVG SSGDDLDAMA EPLPKINKKV 480
  481 GQVNGHDQAK VHELQVMFAG EATHRTHYST THGAYYSGLR EANRLLKHYK CNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle