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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PMTS_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMERKREMGI AYFARRIKQP RGIWVKMTFI VVLGLCFVFF WSFLSSSAST FNVQRESFDD  60
   61 IAEPVSSRTK SAHEVSESSK LHERGKVESG SKSKEGKKVG GSSVHKHETK KKKEHAVSHP 120
  121 HKKKDVPKPV VEEVVVKEDQ EHEEAESDDS DQSNKEDGEE GTESDGNEGE SDGNGDGSVD 180
  181 DSSASVDEEV EEKNEEVTVN EISKKRKRKG PVFDPKAEYS WRLCNTRSKH NYMPCIDNDG 240
  241 LIGRLQSYRH RERSCPKKPV MCLVPLPHDG YDPPVSWPES KSKILYKNVA HPKLAAYIKK 300
  301 HNWVNETGEY LSFPQNQTTF NGNVLQYLEF IQEMVPDIEW GKNVRIVLDI GCSDSSFVAA 360
  361 LLDKDVLTVS LGLKDDLVDL AQVALERGFP TFVSSLASRR LPFPSGVFDT IHCAACGVHW 420
  421 HSHGGKLLLE MNRILRPNGY FILSSNNDKI EDDEAMTALT ASICWNILAH KTEEASEMGV 480
  481 RIYQKPESND IYELRRKKNP PLCEDNENPD AAWYVPMKTC IYEIPSAIEQ HGAEWPEEWP 540
  541 KRLETYPEWL TSKEKAMEDT NHWNAMVNKS YLTGLGIDWL HIRNVMDMTA IYGGFGASLV 600
  601 KQNVWVMNVV PVHSPDTLPF IYERGLLGIY HDWCEPFGTY PRSYDLLHAD HLFSRLKNRC 660
  661 KQPASIVVEM DRLTRPGGWV VVRDKVEILE PLEEILRSLH WEIRMTYAQD KEGMLCAQKT 720
  721 LWRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle