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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CESA7_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASAGLVAG SHNRNELVVI HNHEEPKPLK NLDGQFCEIC GDQIGLTVEG DLFVACNECG  60
   61 FPACRPCYEY ERREGTQNCP QCKTRYKRLR GSPRVEGDED EEDIDDIEYE FNIEHEQDKH 120
  121 KHSAEAMLYG KMSYGRGPED DENGRFPPVI AGGHSGEFPV GGGYGNGEHG LHKRVHPYPS 180
  181 SEAGSEGGWR ERMDDWKLQH GNLGPEPDDD PEMGLIDEAR QPLSRKVPIA SSKINPYRMV 240
  241 IVARLVILAV FLRYRLLNPV HDALGLWLTS VICEIWFAVS WILDQFPKWF PIERETYLDR 300
  301 LSLRYEREGE PNMLAPVDVF VSTVDPLKEP PLVTSNTVLS ILAMDYPVEK ISCYVSDDGA 360
  361 SMLTFESLSE TAEFARKWVP FCKKFSIEPR APEMYFTLKV DYLQDKVHPT FVKERRAMKR 420
  421 EYEEFKVRIN AQVAKASKVP LEGWIMQDGT PWPGNNTKDH PGMIQVFLGH SGGFDVEGHE 480
  481 LPRLVYVSRE KRPGFQHHKK AGAMNALVRV AGVLTNAPFM LNLDCDHYVN NSKAVREAMC 540
  541 FLMDPQIGKK VCYVQFPQRF DGIDTNDRYA NRNTVFFDIN MKGLDGIQGP VYVGTGCVFK 600
  601 RQALYGYEPP KGPKRPKMIS CGCCPCFGRR RKNKKFSKND MNGDVAALGG AEGDKEHLMS 660
  661 EMNFEKTFGQ SSIFVTSTLM EEGGVPPSSS PAVLLKEAIH VISCGYEDKT EWGTELGWIY 720
  721 GSITEDILTG FKMHCRGWRS IYCMPKRPAF KGSAPINLSD RLNQVLRWAL GSVEIFFSRH 780
  781 SPLWYGYKGG KLKWLERFAY ANTTIYPFTS IPLLAYCILP AICLLTDKFI MPPISTFASL 840
  841 FFISLFMSII VTGILELRWS GVSIEEWWRN EQFWVIGGIS AHLFAVVQGL LKILAGIDTN 900
  901 FTVTSKATDD DDFGELYAFK WTTLLIPPTT VLIINIVGVV AGISDAINNG YQSWGPLFGK 960
  961 LFFSFWVIVH LYPFLKGLMG RQNRTPTIVV IWSVLLASIF SLLWVRIDPF VLKTKGPDTS1020
 1021 KCGINC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle