YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SOL1_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLRFFQSL LISTVICFFL PSINARGGHS DHIHPGDGNY SFHGIVRHLF AQEEPTPSLE  60
   61 LTRGYMTNDD LEKAMKDFTK RCSKISRLYS IGKSVNGFPL WVIEISDRPG EIEAEPAFKY 120
  121 IGNVHGDEPV GRELLLRLAN WICDNYKKDP LAQMIVENVH LHIMPSLNPD GFSIRKRNNA 180
  181 NNVDLNRDFP DQFFPFNDDL NLRQPETKAI MTWLRDIRFT ASATLHGGAL VANFPWDGTE 240
  241 DKRKYYYACP DDETFRFLAR IYSKSHRNMS LSKEFEEGIT NGASWYPIYG GMQDWNYIYG 300
  301 GCFELTLEIS DNKWPKASEL STIWDYNRKS MLNLVASLVK TGVHGRIFSL DKGKPLPGLV 360
  361 VVKGINYTVK AHQTYADYHR LLVPGQKYEV TASSPGYKSK TTTVWLGENA VTADFILIPE 420
  421 TSSRGNQLRS SCDCSCKSCG QPLLTQFFTE TNNGITLTLF VVVVFLCFLL QRRVRFNLWK 480
  481 QRQSSRRSIT V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle