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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: 6PGD1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESAALSRIG LAGLAVMGQN LALNIAEKGF PISVYNRTTS KVDETLDRAA VEGNLPVSGQ  60
   61 YSPRDFVLSI QRPRSLIILV KAGAPVDQTI DAFSEYMEPG DCIIDGGNEW YQNTERRISE 120
  121 AEQKGLLYLG MGVSGGEEGA RNGPSLMPGG SFQAYDNIKD ILEKVAAQVE DGPCVTYIGE 180
  181 GGSGNFVKMV HNGIEYGDMQ LISEAYDVLK NVGGLSNEEL AEIFTEWNSG ELESFLVEIT 240
  241 SDIFRVKDEF GDGELVDKIL DKTGMKGTGK WTVQQAAELS VAAPTIAASL DCRYLSGLKD 300
  301 ERENAAKVLR EAGLKEEIGS ASSGIDKKRL VDDVRQALYA SKICSYAQGM NLLRAKSLEK 360
  361 SWNLNFGELA RIWKGGCIIR AVFLDRIKKA YQRNPDLASL VVDPEFAKEM VQRQAAWRRV 420
  421 VGLAVSAGIS TPGMCASLAY FDTYRRARLP ANLVQAQRDL FGAHTYERTD RPGAYHTEWT 480
  481 KLARKNH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle