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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLC6_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSQNEEFQ QWWNKQRDRN NHDVLYAGDD EAFLTVEIRT PATVDPDKDR IRTRTVRQLS  60
   61 RLYLLKFKQL ASSFLWIGNS FLYLVRTANR RIANDNPPSV SSSARLYRLI KGFLVVVVLL 120
  121 LCFELAAYFK GWHFTPPSVA SAEVAVEVVY AWWLEIRASY LAPPLQSLTN VCIVLFLIQS 180
  181 VDRLVLVLGC FWIKLRRIKP VASMEYPTKL VGEGVRLEDY PMVIVQIPMC NEKEVYQQSI 240
  241 GAVCMLDWPR ERMLVQVLDD SSELDVQQLI KAEVQKWQQR GVRIVYRHRL IRTGYKAGNL 300
  301 KAAMNCEYVK DYEFVAIFDA DFQPPADFLK KTVPHFKGNE ELALVQTRWA FVNKDENLLT 360
  361 RLQNINLSFH FEVEQQVNGV FINFFGFNGT AGVWRIKALE DCGGWLERTT VEDMDIAVRA 420
  421 HLCGWKFIYL NDVKCLCELP ESYEAYKKQQ YRWHSGPMQL FRLCFFDILR SKVSAAKKAN 480
  481 MIFLFFLLRK LILPFYSFTL FCVILPLTMF FPEANLPSWV VCYIPGIMSI LNIIPAPRSF 540
  541 PFIVPYLLFE NTMSVTKFGA MISGLFKFDS SYEWVVTKKL GRSSEADLVA YAESGSLVES 600
  601 TTIQRSSSDS GLTELSKLGA AKKAGKTKRN RLYRTEIALA FILLAASVRS LLSAQGIHFY 660
  661 FLLFQGITFV IVGLDLIGEQ VS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle