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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ASPG1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFPRFLSLL AVVTLSLFLT TTDASSRSLS TPPKTNVLDV VSSLQQTQTI LSLDPTRSSL  60
   61 TTTKPESLSD PVFFNSSSPL SLELHSRDTF VASQHKDYKS LTLSRLERDS SRVAGIVAKI 120
  121 RFAVEGVDRS DLKPVYNEDT RYQTEDLTTP VVSGASQGSG EYFSRIGVGT PAKEMYLVLD 180
  181 TGSDVNWIQC EPCADCYQQS DPVFNPTSSS TYKSLTCSAP QCSLLETSAC RSNKCLYQVS 240
  241 YGDGSFTVGE LATDTVTFGN SGKINNVALG CGHDNEGLFT GAAGLLGLGG GVLSITNQMK 300
  301 ATSFSYCLVD RDSGKSSSLD FNSVQLGGGD ATAPLLRNKK IDTFYYVGLS GFSVGGEKVV 360
  361 LPDAIFDVDA SGSGGVILDC GTAVTRLQTQ AYNSLRDAFL KLTVNLKKGS SSISLFDTCY 420
  421 DFSSLSTVKV PTVAFHFTGG KSLDLPAKNY LIPVDDSGTF CFAFAPTSSS LSIIGNVQQQ 480
  481 GTRITYDLSK NVIGLSGNKC 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle