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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSH7_ARATH
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTFEFLQP RIHGFATCCS SNSLLYSKAS RFFNDRCRVY RQNPNRFVSN SITLPLQKKQ  60
   61 VTVLRNHERF NLWDGFSRKK SRLVVNCQED DQNESSSEEE ESSQSTPAKS ERKREKKEDK 120
  121 VWWSKGKKWQ WQPIIQAQGI GVLLLQLSVV MFVMRLLRPG IPLPGSEPRI QTTFVSVPYS 180
  181 EFLSKVNSNQ VQKVEVDGVQ VLFKLRDDGK WQESETSRLS QSSESLLRTV APTKRVVYST 240
  241 TRPGDIKTPY EKMLGNNVEF GSPEKRSGGF FNSALIALFY IAVLAGLIRF PVSFSTSSTG 300
  301 QLRTRKAGGP DGGKVSGGGE TITFADVAGV DEAKEELEEI VEFLRNPEKY VRLGARPPRG 360
  361 VLLVGLPGTG KTLLAKAVAG EAEVPFISCS ASEFVELYVG MGASRVRDLF ARAKKEAPSI 420
  421 IFIDEIDAVA KSRDGKFRMG SNDEREQTLN QLLTEMDGFD SNSAVIVLGA TNRADVLDPA 480
  481 LRRPGRFDRV VTVETPDKIG RESILRVHVS KKELPLGDDV NLGSIASMTT GFTGADLANL 540
  541 VNEAALLAGR KNKTNVEKID FIQAVERSIA GIEKKSARLK GNEKAVVARH EAGHAVVGTA 600
  601 VANLLTGQPR VEKLSILPRT GGALGFTYIP PTSEDRYLLF IDELLGRLVT LLGGRAAEEV 660
  661 VYSGRISTGA FDDIRRATDM AYKAVAEYGL NQKIGPVSVA TLSGGGIDDS GGSPWGRDQG 720
  721 KLVDLVQKEV TILLQSALDV ALSVVRANPD VLEGLGAQLE EKEKVEGEEL QKWLSMVVAP 780
  781 EELAVFVEGK QELLLPAQAS SS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle