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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HTH_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKLFLFAL LLCLPTSLSS TASKGKEKKS KFNPYRYTFI DKASTFSSSS SSSFSSNGQD  60
   61 SSYDYIVIGG GTAGCPLAAT LSQNFSVLVL ERGGVPFTNA NVSFLRNFHI GLADISASSA 120
  121 SQAFVSTDGV YNARARVLGG GSCINAGFYS RADAAFVKRA GWDPKLVKES YPWVEREIVH 180
  181 QPKLTLWQKA LRDSLLEVGV RPFNGFTYDH VSGTKIGGTI FDRFGRRHTA AELLAYANPQ 240
  241 KLRVLIYATV QKIVFDTSGT RPRVTGVIFK DEKGNQHQAL LSNRKGSEVI LSSGAIGSPQ 300
  301 MLMLSGIGPK KELQRLKIPV VLENEHVGKG MADNPMNTIL VPSKAPIEQS LIQTVGITKM 360
  361 GVYVEASTGF GQSPESIHTH YGIMSNKNEL FSTIPAKQRR PEATQAYITR NKYQLHEAFN 420
  421 GSFILEKLAY PISRGHLSLV NTNVDDNPSV TFNYFKHPVD LQRCVEAIRL VSKVVTSNRF 480
  481 LNYTQCDKQN VHKMLSLSVK ANINLRPKQL NDTKSMAQFC KDTVVTIWHY HGGCLVGKVV 540
  541 SPNRKVLGVD RLRVIDGSTF DESPGTNPQA TMMMMGRYMG VKILRERLGN KAGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle