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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BIR2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT  60
   61 LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY CASLQKLDLS SNRLSGNIPT 120
  121 ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF 180
  181 SVANNDLSGR IPVFFSSPSY SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA 240
  241 ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL 300
  301 MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS 360
  361 NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW STRFRIGLGA ARGLAWLHHG 420
  421 CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS 480
  481 TTMLASLKGD VYGLGVVLLE LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG 540
  541 KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ 600
  601 ENEKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle