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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SERA1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATAAASSS IAVATNSLRN VTLSSRSPLP SAISVAFPSR GRNTLQRRLV LVSCSTGDGS  60
   61 KPTILVAEKL GDAGIKLLED VANVDCSYNM TPEELNIKIS LCDALIVRSG TKVGREVFES 120
  121 SHGRLKVVGR AGVGIDNVDL SAATEFGCLV VNAPTANTIA AAEHGIALMA AMARNVAQAD 180
  181 ASVKAGEWKR NKYVGVSLVG KTLAVLGFGK VGTEVARRAK GLGMRVIAHD PYAPADRAHA 240
  241 IGVDLVSFDE ALATADFISL HMPLTPTTSK ILNDETFAKM KKGVRIVNVA RGGVIDEDAL 300
  301 VRALDAGIVA QAALDVFTKE PPAKDSKLVQ HERVTVTPHL GASTMEAQEG VAIEIAEAVV 360
  361 GALNGELAAT AVNAPMVSAE VLTELKPYVV LAEKLGRLAV QLVAGGSGVK NAKITYASAR 420
  421 ATDDLDTRLL RAMITKGIIE PISDVYVNLV NADFTAKQRG LRLSEERVLL DGSPESPLET 480
  481 ITVQLSNVES KFASSLSESG EVKVEGKVKD GVPHLTKVGS FEVDVTLEGS IILCRQVDQP 540
  541 GMIGTVGSIL GESNVNVNFM SVGRIAPRKQ AIMAIGVDDI PSKETLKKIG EIPAVEEFVF 600
  601 LKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle