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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP11_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELTLKLLVL LLFILNHHVG SGSIVKFLPG FEGPLPFELE TGYIGIGEEE EVQLFYYFIK  60
   61 SERNPKEDPL LLWLSGGPGC SSITGLLFQN GPLALKSEVY NGSVPSLVST TYSWTKTANI 120
  121 IFLDQPVGAG FSYSRAPLID TPTDTGEVKR IHEFLQKWLS KHPQFSSNHF YAGGDSYSGM 180
  181 IVPALVQEIS KGNYICCNPP INLKGYVLGN PITHEDDPNY RIPFSHGMAL ISDELYESIR 240
  241 EACKGNYFNV DPRNTKCLKL VEEFHKCTDK LNEFHILSPD CDTASPDCYL YPFYLISFWA 300
  301 NDESVRDALH VNKRSIGKWE RCNYLSKPYN KDIKSSVPYH MNNSVSGYRS LIYSGDHDLV 360
  361 VPFLATQAWI KSLNYSIIDE WRPWMIRDQI TGYTRTYSNK MTFATVKGSG HTAENKPQES 420
  421 FIMFRRWING QPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle