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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP42_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS  60
   61 LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP FYPTGDGRGL RVNSMSWNKA 120
  121 SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY 180
  181 AGHYIPQLAD AILSYNSHSS GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK 240
  241 LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL 300
  301 KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID 360
  361 MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ DLNFKTTVPY GAWFHKSQVG 420
  421 GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle