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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HS905_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPALSRSLY TSPLTSVPIT PVSSRLSHLR SSFLPHGGAL RTGVSCSWNL EKRCNRFAVK  60
   61 CDAAVAEKET TEEGSGEKFE YQAEVSRLLD LIVHSLYSHK EVFLRELVSN ASDALDKLRF 120
  121 LSVTEPSLLG DGGDLEIRIK PDPDNGTITI TDTGIGMTKE ELIDCLGTIA QSGTSKFLKA 180
  181 LKENKDLGAD NGLIGQFGVG FYSAFLVAEK VVVSTKSPKS DKQYVWESVA DSSSYLIREE 240
  241 TDPDNILRRG TQITLYLRED DKYEFAESTR IKNLVKNYSQ FVGFPIYTWQ EKSRTIEVEE 300
  301 DEPVKEGEEG EPKKKKTTKT EKYWDWELAN ETKPLWMRNS KEVEKGEYNE FYKKAFNEFL 360
  361 DPLAHTHFTT EGEVEFRSIL YIPGMGPLNN EDVTNPKTKN IRLYVKRVFI SDDFDGELFP 420
  421 RYLSFVKGVV DSDDLPLNVS REILQESRIV RIMRKRLIRK TFDMIQEISE SENKEDYKKF 480
  481 WENFGRFLKL GCIEDTGNHK RITPLLRFFS SKNEEELTSL DDYIENMGEN QKAIYYLATD 540
  541 SLKSAKSAPF LEKLIQKDIE VLYLVEPIDE VAIQNLQTYK EKKFVDISKE DLELGDEDEV 600
  601 KDREAKQEFN LLCDWIKQQL GDKVAKVQVS NRLSSSPCVL VSGKFGWSAN MERLMKAQAL 660
  661 GDTSSLEFMR GRRILEINPD HPIIKDLNAA CKNAPESTEA TRVVDLLYDT AIISSGFTPD 720
  721 SPAELGNKIY EMMAMAVGGR WGRVEEEEES STVNEGDDKS GETEVVEPSE VRAESDPWQD 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle