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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB1G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARIVAANDD DSMELNTISS IHDSTLGQLL KNVSDVRKMA IGDETPVHES LNQDYNDGYM  60
   61 RTVPFVLSFD NLTYNVSVRP KLDFRNLFPR RRTEDPEIAQ TARPKTKTLL NNISGETRDG 120
  121 EIMAVLGASG SGKSTLIDAL ANRIAKGSLK GTVKLNGETL QSRMLKVISA YVMQDDLLFP 180
  181 MLTVEETLMF AAEFRLPRSL PKSKKKLRVQ ALIDQLGIRN AAKTIIGDEG HRGISGGERR 240
  241 RVSIGIDIIH DPILLFLDEP TSGLDSTSAF MVVKVLKRIA QSGSIVIMSI HQPSHRVLGL 300
  301 LDRLIFLSRG HTVYSGSPAS LPRFFTEFGS PIPENENRTE FALDLIRELE GSAGGTRGLI 360
  361 EFNKKWQEMK KQSNRQPPLT PPSSPYPNLT LKEAIAASIS RGKLVSGGES VAHGGATTNT 420
  421 TTLAVPAFAN PMWIEIKTLS KRSMLNSRRQ PELFGIRIAS VVITGFILAT VFWRLDNSPK 480
  481 GVQERLGFFA FAMSTMFYTC ADALPVFLQE RYIFMRETAY NAYRRSSYVL SHAIVSFPSL 540
  541 IFLSVAFAAT TYWAVGLDGG LTGLLFYCLI ILASFWSGSS FVTFLSGVVP SVMLGYTIVV 600
  601 AILAYFLLFS GFFINRNRIP DYWIWFHYMS LVKYPYEAVL QNEFSDATKC FVRGVQIFDN 660
  661 TPLGELPEVM KLKLLGTVSK SLGVTISSTT CLTTGSDILR QQGVVQLSKW NCLFITVAFG 720
  721 FFFRILFYFT LLLGSKNKRR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle