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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPA15_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFLLLLLFC FLSPAISSAH SIPSTLDGPF VPVTVPLDTS LRGQAIDLPD TDPRVRRRVI  60
   61 GFEPEQISLS LSSDHDSIWV SWITGEFQIG KKVKPLDPTS INSVVQFGTL RHSLSHEAKG 120
  121 HSLVYSQLYP FDGLLNYTSG IIHHVRITGL KPSTIYYYRC GDPSRRAMSK IHHFRTMPVS 180
  181 SPSSYPGRIA VVGDLGLTYN TTDTISHLIH NSPDLILLIG DVSYANLYLT NGTSSDCYSC 240
  241 SFPETPIHET YQPRWDYWGR FMENLTSKVP LMVIEGNHEI ELQAENKTFE AYSSRFAFPF 300
  301 NESGSSSTLY YSFNAGGIHF VMLGAYIAYD KSAEQYEWLK KDLAKVDRSV TPWLVASWHP 360
  361 PWYSSYTAHY REAECMKEAM EELLYSYGTD IVFNGHVHAY ERSNRVYNYE LDPCGPVYIV 420
  421 IGDGGNREKM AIEHADDPGK CPEPLTTPDP VMGGFCAWNF TPSDKFCWDR QPDYSALRES 480
  481 SFGHGILEMK NETWALWTWY RNQDSSSEVG DQIYIVRQPD RCPLHHRLVN HC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle