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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPA1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRESLVAILV TVISVLGAIH QVKSHEDQPL SGIAVHKITF GLNEKAYVKA SPTVLGSNGQ  60
   61 HSELVLVQYS SPKPSDDDWI GVFSPADFNA STCPGDNKMV QPPRLCSAPV KFQYANFSNP 120
  121 RYTNTGTGSL KLQLINQRSD FSFALFSGGL LNPKLVAISN KVAFENPNAP VYPRLALGKE 180
  181 WDEMTVTWTS GYGLNLAEPV VEWGVKGGER KLSPAGTLTF ARNSMCGAPA RTVGWRDPGY 240
  241 IHTAFLKELW PNSKYTYRVG HRLSNGALIW SKEYQFKSSP FPGQNSVQQV VIFGDMGKAE 300
  301 VDGSSEYNDF QRASLNTTKQ LIKDLKKTDA VFHIGDICYA NGYLSQWDQF IAQIEPIAST 360
  361 VPYMIASGNH ERVWPNSGSF YEGLDSGGEC GVPAETMFYV PAQNRAKVWY SSDYGMFRFC 420
  421 VADTEHDWRE GTEQYNFIEH CLASVDRQKQ PWLIFLAHRV LGYSSTYFYA EEGSFAEPMG 480
  481 RESLQKLWQK YKVDIAIYGH AHNYERTCPV YQSVCTSHEK SNYKAPLNGT IHIVAGGGGA 540
  541 GLAEFSDLQP NWSLFRDYDY GFLKLTAIDH SNLLFEYKKS SDGRVHDSFT ISKDYRDILA 600
  601 CAVDSCPATT LAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle