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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP25_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMAKLAIFT TLMAILVMTS QGRIPTEGGE KEAEADRITS LPGQPNVTFE QFSGYVTVDK  60
   61 LSGRSLFYWL TEASDLPLSK PLVIWLNGGP GCSSVAYGAS EEIGPFRISK GGSGLYLNKF 120
  121 AWNSISNLLF LEAPAGVGFS YTNRSSDLFN TGDRRTAKDS LQFLIQWLHR FPRYNHREIY 180
  181 ITGESYAGHY VPQLAKEIMN YNKRSKNPLN LKGIMVGNAV TDNHYDNLGT VSYWWSHAMI 240
  241 SDRTYHQLIS TCDFSRQKES DECETLYSYA MEQEFGNIDQ YNIYAPPCNK SSDGGGSYNG 300
  301 SSGRRSMRLP HLPHSVLRKI SGYDPCTERY AEIYYNRPDV QKALHANTTK IPYKWTACSE 360
  361 VLNRNWNDTD STVLPIYREM IAGGIRVWVF SGDVDSVVPV TATRYSLARL SLSTKLPWYP 420
  421 WYVKKQVGGW TEVYEGLTFV TVRGAGHEVP LFKPRAAFEL FKYFLRGKPL PKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle