YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NAC17_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPEE  60
   61 LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK ATGKDRVIEY NSRSVGLKKT 120
  121 LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP 180
  181 FQEEEWVDDD NEDVNAIAVA VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN 240
  241 APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK 300
  301 EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA 360
  361 NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS TTLNQITSDI WFEDDQAILF 420
  421 DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP 480
  481 ASACEGPLNR TFVRMSSFSR MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW 540
  541 VLVATVRVSG RSLLLKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle