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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: QSOX2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVHLLLFA GLVIAASSSS PGSRLILREI SDQKDKAVEL NTTNFDSVLK DTPAKYAVVE  60
   61 FFAHWCPACR NYKPHYEKVA RLFNGPDAIH PGIVLMTRVD CAMKTNTKLC DKFSVSHYPM 120
  121 LFWGPPTKFV SGSWEPKKDK SEILVIDDGR TAERLLNWIN KQIGSSYGLD DQKFKNEHAL 180
  181 SNLTDYNQIS QAVYDVEEAT AEAFDIILAH KAIKSSETSA SFIRFIQLLA AHHLSRRCRK 240
  241 GAAEILVNYD DLCPSGNCSY EKSGGNDTLG NFPICGKDVP RGYYMFCRGS KNDTRGFSCG 300
  301 LWVLMHSLSV RIEDGESHFA FTTICDFVNN FFMCDECRLH FNDMCLSVKT PFKKARDFVL 360
  361 WVWSTHNKVN ERLLKDEASL GTGDPKFPKI IWPPKELCPL CYLSSNQKSI EWDHEHVYKF 420
  421 LKNYYGPKLV SLYKEKSVSR SKEETVSATE DLTVATNALV VPIGAALAIA IASCAFGALA 480
  481 CYWRTQQKNR KPRRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle