YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RGLG2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTGNSKENW RQSSFRSTSA SSASPSSSSW ASQQSYPQYG AESYNYPPPP SYAQPPEYTQ  60
   61 PPPPLYSTQP YSAPSYSAPP SQSYGSDNKK RLERKYSKIS DDYSSLEQVT EALARAGLES 120
  121 SNLIVGIDFT KSNEWTGARS FNRKSLHFIG SSPNPYEQAI TIIGRTLAAF DEDNLIPCYG 180
  181 FGDASTHDQD VFSFNSEDRF CNGFEEVLSR YKEIVPQLKL AGPTSFAPII DMAMTIVEQS 240
  241 GGQYHVLVII ADGQVTRSVD TENGQLSPQE QKTVDAIVQA SKLPLSIVLV GVGDGPWDMM 300
  301 REFDDNIPAR AFDNFQFVNF TEIMAKNKAQ SLKETEFALS ALMEIPQQYK ATIELNLLGR 360
  361 RNGYIPERFP LPPPMRGGSS SYNSPKPSRL PSFKPSVPPH PTEGYHVRSS PVPPPTSSAS 420
  421 DNQLCPICLS NPKDMAFGCG HQTCCECGPD LQMCPICRAP IQTRIKLY

Type	Start	End	Confidence
Signal Peptide	1	31	0.77
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	468	0.99