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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RKF3_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLRRIAVV FFVFTSFSAA QNSTCPLDFS VLEPFRRPKP DGATTCQYLL QGLRLLYSHH  60
   61 LRQTGSFLPP PESAASCWAA LQSSVAGFLP RFDVRSTCGF QTPWISQGCM DITTRSQFES 120
  121 LIPNSSLATT AMRCNTSLES NTPCASCTQS LSAFQPYLSG PSLGNVSDCA SFPSIYAAAF 180
  181 ANSLGPTDKG TAKCLFQLDL ASPTSSGANK VKVLVSSFSV LLVASVLVIT AWFWYCRRKK 240
  241 SKLLKPRDTS LEAGTQSRLD SMSESTTLVK FSFDEIKKAT NNFSRHNIIG RGGYGNVFKG 300
  301 ALPDGTQVAF KRFKNCSAGG DANFAHEVEV IASIRHVNLL ALRGYCTATT PYEGHQRIIV 360
  361 CDLVSNGSLH DHLFGDLEAQ LAWPLRQRIA LGMARGLAYL HYGAQPSIIH RDIKASNILL 420
  421 DERFEAKVAD FGLAKFNPEG MTHMSTRVAG TMGYVAPEYA LYGQLTEKSD VYSFGVVLLE 480
  481 LLSRRKAIVT DEEGQPVSVA DWAWSLVREG QTLDVVEDGM PEKGPPEVLE KYVLIAVLCS 540
  541 HPQLHARPTM DQVVKMLESN EFTVIAIPQR PIPLVACREE IDRSVSSSSG SGKLTSPTGY 600
  601 QAFSFGGDGP SGNTNTT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle