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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PUB17_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAAIFSSL RRRRSPSLEA FLAPVDLSGV ALVQTLASIS SEVVSCFTSV RFSFQRKNAR  60
   61 SLIRKIEIFV VLFEFLVDSN WGSTTTRTRA RRRSKSSVSE STALLCLKEL YLLLYRSKIL 120
  121 VDYCAQSSKL WLLLQNPSIS GYFHDLNQEI STLLDVLPVN DLGLSDDIRE QIELLQRQSR 180
  181 KARLYIDKND ESLRESFYSF LDGFENGKIP SSVDLRMFFV EKLGIRDSKS CRSEIEFLEE 240
  241 QIVNHDGDLE PTGSVINGFV AITRYCRFLL FGFEEDGMEW WIENNPKKPR KGFVAQEIGD 300
  301 TFITVPKDFV CPISLDLMTD PVIISTGQTY DRNSIARWIE EGHCTCPKTG QMLMDSRIVP 360
  361 NRALKNLIVQ WCTASGISYE SEFTDSPNES FASALPTKAA VEANKATVSI LIKYLADGSQ 420
  421 AAQTVAAREI RLLAKTGKEN RAYIAEAGAI PHLCRLLTSE NAIAQENSVT AMLNLSIYEK 480
  481 NKSRIMEEGD CLESIVSVLV SGLTVEAQEN AAATLFSLSA VHEYKKRIAI VDQCVEALAL 540
  541 LLQNGTPRGK KDAVTALYNL STHPDNCSRM IEGGGVSSLV GALKNEGVAE EAAGALALLV 600
  601 RQSLGAEAIG KEDSAVAGLM GMMRCGTPRG KENAVAALLE LCRSGGAAVA EKVLRAPAIA 660
  661 GLLQTLLFTG TKRARRKAAS LARVFQRREN AAMRSGVYGF VGNTNGNRDG GFTTDVSVPI 720
  721 SISISVPVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle