YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYKM_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALKVWSLT ATPLKQLLRL SSSSTRLATT IYGRRSYHLS PALRCASAAS SSSSSATTAE  60
   61 TSKPSGRNRR SASSSNSTSD REAIRSIRLK KVEELRGQGL EPYAYKWEKS HSANQLQEIY 120
  121 KHLANGEESD NEIDCVSIAG RVVARRAFGK LAFLTLRDDS GTIQLYCEKE RLSDDQFEQL 180
  181 KQFIDIGDIL GASGSMKRTE KGELSICVNS FSILTKSLLP LPDKYHGLTD IDKRYRQRYV 240
  241 DMIANPEVAD VFRRRAKIVS EIRKTVESFG YLEVETPVLQ GAAGGAEARP FVTFHNSLGR 300
  301 DLYLRIATEL HLKRMLVGGF EKVYEIGRIF RNEGISTRHN PEFTTIEMYE AYSDYHSMMD 360
  361 MAELIVTQCS MAVNGKLTID YQGTEICLER PWRRETMHNL VKEITGINFS ELGEDLGNAK 420
  421 DTVLLALQDV LEPKDKSGIR ACSSLGHLLN EIFEVVVEPK LVQPTFVLDY PIEISPLAKP 480
  481 HRGNAGLTER FELFICGREM ANAFSELTDP VDQRTRLEEQ VRQHNAKRAE AVRESPEPNA 540
  541 KKDDDDDESY EVTLDEDFLT ALEYGMPPAS GMGLGIDRLV MLLTNSASIR DVIAFPVLKL 600
  601 QQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle