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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15240265, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.54
Topology Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTTVAADLH RYLFLITVFL FFLCDKTSLA LTTDGVLLLS FRYSIVDDPL YVFRSWRFDD  60
   61 ETPCSWRGVT CDASSRHVTV LSLPSSNLTG TLPSNLGSLN SLQRLDLSNN SINGSFPVSL 120
  121 LNATELRFLD LSDNHISGAL PASFGALSNL QVLNLSDNSF VGELPNTLGW NRNLTEISLQ 180
  181 KNYLSGGIPG GFKSTEYLDL SSNLIKGSLP SHFRGNRLRY FNASYNRISG EIPSGFADEI 240
  241 PEDATVDLSF NQLTGQIPGF RVLDNQESNS FSGNPGLCGS DHAKHPCRDG EATSPPPSPT 300
  301 PNSPPALAAI PNTIGLTNHP ISSKTGPKSK WDHKPVLIIG IVVGDLAGLA ILGIVFFYIY 360
  361 QSRKRKTVTA TSKWSTSSTD SKVSKWYCLR KSVYVDGDCE EEEEESETSE SESDEENPVG 420
  421 PNRRSGLDDQ EKKGTLVNLD SEKELEIETL LKASAYILGA TGSSIMYKAV LQDGTAVAVR 480
  481 RIAECGLDRF RDFEAQVRAV AKLIHPNLVR IRGFYWGSDE KLVIYDFVPN GSLANARYRK 540
  541 VGSSPCHLPW DARLKIAKGI ARGLTYVHDK KYVHGNLKPS NILLGLDMEP KVADFGLEKL 600
  601 LIGDMSYRTG GSAPIFGSKR STTSLEFGPS PSPSPSSVGL PYNAPESLRS IKPNSKWDVY 660
  661 SFGVILLELL TGKIVVVDEL GQVNGLVIDD GERAIRMADS AIRAELEGKE EAVLACLKMG 720
  721 LACASPIPQR RPNIKEALQV LERFPVHSSQ Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle