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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RH9_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISTVLRRSI LGTSRRTLAA SVTSINAALF HNLAPAAATV SDLANGATNV KSLPSNSSPF  60
   61 GVKVRDFHVK SVPSEFRSSI VSSAGFAAQE YAPSYENDGG IGDSESVGSS GGGDGLAIAD 120
  121 LGISPEIVKA LKGRGIEKLF PIQKAVLEPA MEGRDMIGRA RTGTGKTLAF GIPIIDKIIK 180
  181 FNAKHGRGKN PQCLVLAPTR ELARQVEKEF RESAPSLDTI CLYGGTPIGQ QMRELNYGID 240
  241 VAVGTPGRII DLMKRGALNL SEVQFVVLDE ADQMLQVGFA EDVEIILQKL PAKRQSMMFS 300
  301 ATMPSWIRSL TKKYLNNPLT IDLVGDSDQK LADGITMYSI AADSYGRASI IGPLVKEHGK 360
  361 GGKCIVFTQT KRDADRLAFG LAKSYKCEAL HGDISQAQRE RTLAGFRDGN FSILVATDVA 420
  421 ARGLDVPNVD LVIHYELPNN TETFVHRTGR TGRAGKKGSA ILIHGQDQTR AVKMIEKEVG 480
  481 SRFNELPSIA VERGSASMFE GVGARSGGSF GGGRSGGGGY GSYGSSSGRS GGGSYGGYGG 540
  541 SSGRSGGGGG SYGGSGGSSS RYSGGSDRSS GFGSFGSGGS SGGFGSDRSS QSSGRSSFGG 600
  601 FGSNDGKRSY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle