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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRK59_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFVLVLLL VLQFFSNKAL SQSEEGEFGF NGYLYDNSGI AITNSKGLMK LTNSSEFSYG  60
   61 HVFYNSPVRF KNSPNGTVSS FSTTFVFAIV SNVNALDGHG LAFVISPTKG LPYSSSSQYL 120
  121 GLFNLTNNGD PSNHIVAVEF DTFQNQEFDD MDNNHVGIDI NSLSSEKAST AGYYEDDDGT 180
  181 FKNIRLINQK PIQAWIEYDS SRRQLNVTIH PIHLPKPKIP LLSLTKDLSP YLFDSMYVGF 240
  241 TSATGRLRSS HYILGWTFKL NGTASNIDIS RLPKLPRDSR STSVKKILAI SLSLTSLAIL 300
  301 VFLTISYMLF LKRKKLMEVL EDWEVQFGPH RFAYKDLYIA TKGFRNSELL GKGGFGKVYK 360
  361 GTLSTSNMDI AVKKVSHDSR QGMREFVAEI ATIGRLRHPN LVRLLGYCRR KGELYLVYDC 420
  421 MPKGSLDKFL YHQPEQSLDW SQRFKIIKDV ASGLCYLHHQ WVQVIIHRDI KPANVLLDDS 480
  481 MNGKLGDFGL AKLCEHGFDP QTSNVAGTFG YISPELSRTG KASTSSDVFA FGILMLEITC 540
  541 GRRPVLPRAS SPSEMVLTDW VLDCWEDDIL QVVDERVKQD DKYLEEQVAL VLKLGLFCSH 600
  601 PVAAVRPSMS SVIQFLDGVA QLPNNLFDIV KARENVGAIE GFGEAAESLA EPCSVATLTF 660
  661 TEPFVSHGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle