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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y1136_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIVACLLLI TALFSSYGYA AITTSSPLSI GVTLSSPGGS YELGFFSSNN SGNQYVGIWF  60
   61 KKVTPRVIVW VANREKPVSS TMANLTISSN GSLILLDSKK DLVWSSGGDP TSNKCRAELL 120
  121 DTGNLVVVDN VTGNYLWQSF EHLGDTMLPL TSLMYDIPNN KKRVLTSWKS ETDPSPGEFV 180
  181 AEITPQVPSQ GLIRKGSSPY WRSGPWAGTR FTGIPEMDAS YVNPLGMVQD EVNGTGVFAF 240
  241 CVLRNFNLSY IKLTPEGSLR ITRNNGTDWI KHFEGPLTSC DLYGRCGPFG LCVRSGTPMC 300
  301 QCLKGFEPKS DEEWRSGNWS RGCVRRTNLS CQGNSSVETQ GKDRDVFYHV SNIKPPDSYE 360
  361 LASFSNEEQC HQGCLRNCSC TAFSYVSGIG CLVWNQELLD TVKFIGGGET LSLRLAHSEL 420
  421 TGRKRIKIIT VATLSLSVCL ILVLVACGCW RYRVKQNGSS LVSKDNVEGA WKSDLQSQDV 480
  481 SGLNFFEIHD LQTATNNFSV LNKLGQGGFG TVYKGKLQDG KEIAVKRLTS SSVQGTEEFM 540
  541 NEIKLISKLQ HRNLLRLLGC CIDGEEKLLV YEYMVNKSLD IFIFDLKKKL EIDWATRFNI 600
  601 IQGIARGLLY LHRDSFLRVV HRDLKVSNIL LDEKMNPKIS DFGLARLFHG NQHQDSTGSV 660
  661 VGTLGYMSPE YAWTGTFSEK SDIYSFGVLM LEIITGKEIS SFSYGKDNKN LLSYAWDSWS 720
  721 ENGGVNLLDQ DLDDSDSVNS VEAGRCVHIG LLCVQHQAID RPNIKQVMSM LTSTTDLPKP 780
  781 TQPMFVLETS DEDSSLSHSQ RSNDLSSVDE NKSSEELNAS S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle