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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TPS4_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPRLLVVS MSLPVTAKRT GEESWSFTMS PGGLVSALLG LKEFETKWIG WPGVDVHDAI  60
   61 GKKTLSITLA EKGCIPVFLE EVCDQYYNGY CNNILWPIFH YLGTPPEYRN DATITYQSQY 120
  121 EAYKKANQIF FDVVKEHYEE GDVVWCHDYH VMLLPQYLKE YNSKMKVGWF LHTPFPSSEM 180
  181 YKTLPSRSDL LRSVLTADLV GFHTYDFARH FLNACMCILG VEATSEGIVD QGKVTRVAVF 240
  241 PIGIEPERFI NTSELSEVVQ YMKKFKNDFG GRKLILGVDR LDTIKGIPQK YQAFEKFLEE 300
  301 NAEWRGKVML LQIAVPTRNG IGEYQKIKDQ CHYHVGRING RFGSISSVPI IHLDCSIDFN 360
  361 QLCALYAITD VLLVTSLRDG MNLVSSEFIA CQKAEKGVLI LSEFAGAGQS LGAGAILVNP 420
  421 WNIKEVSSAI GEALNMSHEE KERKHKINFQ YVKTHSTQQW ADDFMKLTLT NILCSKLIEI 480
  481 TTSAELGAGL AATLELPEHD VIQQYSKSNN RLLILGFYGT LTQPMKNQER RGDGMNLELH 540
  541 PQLKERLKEL CSDPKTTVVV LSRSEKCILD KNFGEYNMWL AAENGMFLRH TSGEWVTRIP 600
  601 EHMNLEWIDG VKHVFKYFTE RTPGSYLETS EASLVWNYEN ADAEFGRAQA RDMLQHLWAG 660
  661 PISNASVDVV RGGQSVEVHA VGVTKGSAME RILGEIVHNK SMATPIDYVL CIGCFLGKDE 720
  721 DVYTFFEPEL TKKAKSLSSS GSDSPKKVSS TIVDLKGENY FSVAIGQTHT KARYFLDSSD 780
  781 DVVKLIGKLC THNNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle