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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPA6_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNLVIFAFL FLSITTVING GITSKFVRQA LPSIEMSLDT FPSPGGYNTP EQVHLTQGDH  60
   61 DGRGMIVSWV TPLNLAGSNV VTYWIATNGS DVKPAKKRAH ASTKSYRFYD YSSGFLHHAT 120
  121 IKGLEYDTKY IYEVGTDKSV RQFSFTTPPK IGPDVPYTFG IIGDLGQTYA SNETLYHYMS 180
  181 NPKGQAVLFA GDLSYADDHP NHDQRKWDTW GRFMEPCAAY QPFIFAAGNH EIDFVPNIGE 240
  241 PHAFKPYTHR YPNAYKASQS TSPLWYSVRR ASAHIIVLSS YSAYGKYTPQ YIWLEQELKN 300
  301 VNREETPWLI VIVHSPWYNS NNYHYMEGES MRVMFESWLV NSKVDLVLSG HVHAYERSER 360
  361 ISNIKYNITN GLSSPVKDPN APIYITIGDG GNIEGIANSF VDPQPSYSAY REASFGHAVL 420
  421 EIMNRTHAQY TWHRNQDNEP VAADSIMLHN RHFFPVEEIV SSNIRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle