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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C78A5_ARATH
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPEAYVLFF NSFNLVTFEA FASVSLIIAT VAFLLSPGGL AWAWTGSSKS RVSIPGPSGS  60
   61 LSVFSGSNPH RVLAALAKRF KASPLMAFSV GFSRFVISSE PETAKEILSS SAFADRPVKE 120
  121 SAYELLFHRA MGFAPYGEYW RNLRRISSTH LFSPRRIASF EGVRVGIGMK MVKKIKSLVT 180
  181 SDACGEVEVK KIVHFGSLNN VMTTVFGESY DFDEVNGKGC FLERLVSEGY ELLGIFNWSD 240
  241 HFWFLRWFDF QGVRKRCRAL VSEVNTFVGG IIEKHKMKKG NNLNGEENDF VDVLLGLQKD 300
  301 EKLSDSDMIA VLWEMIFRGT DTVAILVEWV LARMVLHQDI QDKLYREIAS ATSNNIRSLS 360
  361 DSDIPKLPYL QAIVKETLRL HPPGPLLSWA RLAIHDVHVG PNLVPAGTIA MVNMWSITHN 420
  421 AKIWTDPEAF MPERFISEDV SIMGSDLRLA PFGSGRRVCP GKAMGLATVH LWIGQLIQNF 480
  481 EWVKGSCDVE LAEVLKLSME MKNPLKCKAV PRNVGFA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle