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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7485548, gi|3...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEIGGAEAV INLKSGYSLP ISYHPCFGPH EDLLLLEADD KLVSDIFHQR YDFEAFGVTL  60
   61 RGLPDEDAVL CTKSKTYAIK FVGNSNSMFL IPPSIFPGDA QVSDTNNNVS VLKIAPGNME 120
  121 LVEASPRLDK LKQILLANPF GAGEVEAMMD VDNDDLDHSG KKDLALYTWS DLVNTVQASD 180
  181 EELRNGLQSL SAIEIDGFWR VIDENYLDVI LRMLLHNCVL KDWSFDDLDE DEVVNALVAD 240
  241 EFPSQLASHC LRVFGSKVNE TDKWKLEPRL VCLHFARQIL REEKMRLESF MEEWKKKIPD 300
  301 GMEERFEMLE GEVLTEKIGI ETRVYTFSVR SLPSTPEERF SVLFKHRSKW EWKDLEPYLR 360
  361 FACFLASRSW RRYRTFTVQH RRRWRKTAAE EKHSSPYCTI CLEDAAEGEK MRRITACSHC 420
  421 FHVDCIDPWL MKKSTCPLCR AEIPPVPPGN PLVALFVPPG VIEMFTKGII PDALLIFSRM 480
  481 FVETVIQLSQ FIAESVIIVS VAVFTLRLFY RFACFLASRS WRRYRTFTVH HRRRWRKTTA 540
  541 EEKHSSPYCT ICLENATEGE KMRRIAACSH CFHVDCIDPW LEKKSMCPLC RAEIPPVPPG 600
  601 NPLRALFIPP GVIEMFTKGI DSDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle