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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: APA3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTRFQSFLL VFLLSCLILI STASCERNGD GTIRIGLKKR KLDRSNRLAS QLFLKNRGSH  60
   61 WSPKHYFRLN DENADMVPLK NYLDAQYYGD ITIGTPPQKF TVIFDTGSSN LWIPSTKCYL 120
  121 SVACYFHSKY KASQSSSYRK NGKPASIRYG TGAISGYFSN DDVKVGDIVV KEQEFIEATS 180
  181 EPGITFLLAK FDGILGLGFK EISVGNSTPV WYNMVEKGLV KEPIFSFWLN RNPKDPEGGE 240
  241 IVFGGVDPKH FKGEHTFVPV THKGYWQFDM GDLQIAGKPT GYCAKGCSAI ADSGTSLLTG 300
  301 PSTVITMINH AIGAQGIVSR ECKAVVDQYG KTMLNSLLAQ EDPKKVCSQI GVCAYDGTQS 360
  361 VSMGIQSVVD DGTSGLLNQA MCSACEMAAV WMESELTQNQ TQERILAYAA ELCDHIPTQN 420
  421 QQSAVDCGRV SSMPIVTFSI GGRSFDLTPQ DYIFKIGEGV ESQCTSGFTA MDIAPPRGPL 480
  481 WILGDIFMGP YHTVFDYGKG RVGFAKAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle