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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9293884
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKICNQQYIL ALGVRRNRFI WFGVNGDQEP RRRRQTRQSE GPINMEDNVD EKSTEKVMED  60
   61 DVDRMNENRE KRVEASSGYN DWRNAAQRLK RHETTHRHII SMTHWMEIEV RLQKSKTIDN 120
  121 HMEEAIKKEK KYWRDVLVRI IAVVKTLAEQ TKEKVDDPNS GNVLAFIRMI GGFDLVMKEQ 180
  181 IRRANKGEIH CHFLSHKIQN ELIELLANET KMMILKKIKD AKYFSVILDS SPDDSRKEQM 240
  241 TFLIRCVDVS TCSPKIEEFF STFLHIKDKR GEGLFKTLQD ALIDLKLNID DIRGQGYDNG 300
  301 HNMMGKHKGV QKSEYIVYLQ LQPTIGKCRE TMNCITLKLL SQTRWESRID SLKPIRYQAS 360
  361 KIRDALFYLA EYSDNPRHRS DVESLAESET HGIGGFEFLF GMVIWYDLLA AVNIVFPIKP 420
  421 KRLVKKKKPF GEDVEKIDES KTAKESFRIH YFMNIMDQAI MSIEVRFEQF QEYEKIFGFL 480
  481 FGVKRLKVAE DDELRTSCMK LEASLKHDVH SDVDGEDLFM ELKLLKDVLP KEITKPVEVL 540
  541 DFLKRMDGCY PNTWITYRIL LTIPVSIASA ERTFPKLKLI KNYLRSTVPQ ERLNGLALIS 600
  601 IEQELVKKLD YQKLINEFAG AKARRIMFRH EEKLYFCLFF LLTIFLFNFL KQNKFHIILF 660
  661 CEKILGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle