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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PDI23_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKSPLTLLT LLTICFGFFD LSSALYGSSS PVVQLTASNF KSKVLNSNGV VLVEFFAPWC  60
   61 GHCKALTPTW EKVANILKGV ATVAAIDADA HQSAAQDYGI KGFPTIKVFV PGKAPIDYQG 120
  121 ARDAKSIANF AYKQIKGLLS DRLEGKSKPT GGGSKEKKSE PSASVELNAS NFDDLVIESN 180
  181 ELWIVEFFAP WCGHCKKLAP EWKRAAKNLQ GKVKLGHVNC DVEQSIMSRF KVQGFPTILV 240
  241 FGPDKSSPYP YEGARSASAI ESFASELVES SAGPVEVTEL TGPDVMEKKC GSAAICFISF 300
  301 LPDILDSKAE GRNKYLEMLL SVAEKFKKQP YSFMWVAAVT QMDLEKRVNV GGYGYPAMVA 360
  361 MNVKKGVYAP LKSAFELQHL LEFVKDAGTG GKGNVPMNGT PEIVKTKEWD GKDGELIEED 420
  421 EFSLDELMGG DDAVGSKDEL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle