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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7487351, gi|7...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTMVAHMD RHNKIDVEIS EDDKRLTKLC SLKKKAINAT NKFKHSMTKK GRRHSRVACV  60
   61 SIVDEIDTEE LQAVDAFRQA LILDELLPSK HDDHHMMLRF LRARKFDLEK AKQMWSDMLN 120
  121 WRKEYGADTI MEDFDFKEIE EVVKYYPQGY HGVDKEGRPI YIERLGQVDA TKLMKVTTID 180
  181 RYVKYHVKEF EKTFNVKFPA CSIAAKRHID QSTTILDVQG VGLSNFNKAA KDLLQSIQKI 240
  241 DNDNYPETLN RMFIINAGCG FRLLWNTVKS FLDPKTTAKI HVLGNKYQTK LLEIIDANEL 300
  301 PEFLGGKCTC ADKGGCMRSD KGPWNDPEIF KLVQNGEGRC LRRSLSGIEE KTIFEYNNET 360
  361 KKKCEPEETH KQSAAEMEKK FIDTNVDAAA AADWPTKLNK AEKNPTDLKD VYSAVNPLER 420
  421 KGYLYGSVMA LLMGIVGVMR LTKNMPRRLT EANVYSREGS AVYQDGVTVM SKQEYIAMVK 480
  481 KITDLEEKCK SMEAQAAFYM EREKTLDAAL RRIDQLELQL SETNKVKLFF SLASLLLCLL 540
  541 CFVIALFSKT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle