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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3056590
Protein type: Globular with Signal Peptide
Type Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFLFLLLER KNKHMGKKRV VLLWLSIFIS FSSAEITEES PLSIGQTLSS SNGVYELGFF  60
   61 SFNNSQNQYV GISFKGIIPR VVVWVANREK PVTDSAANLV ISSNGSLQLF NGKHGVVWSS 120
  121 GKALASNGSR VELLDSGNLV VIEKVSGRTL WESFEHLGDT LLPHSTIMYN VHTGEKRGLT 180
  181 SWKSYTDPSP GDFVVLITPQ VPSQGFLMRG STPYFRSGPW AKTKFTGLPQ MDESYTSPFS 240
  241 LTQDVNGSGY YSYFDRDNKR SRIRLTPDGS MKALRYNGMD WDTTYEGPAN SCDIYGVCGP 300
  301 FGFCVISVPP KCKCFKGFIP KSIEEWKTGN WTSGCVRRSE LHCQGNSTGK DANVFHTVPN 360
  361 IKPPDFYEYA DSVDAEECQQ NCLNNCSCLA FAYIPGIGCL MWSKDLMDTV QFAAGGELLS 420
  421 IRLARSELDV NKRKKTIIAI TVSLTLFVIL GFTAFGFWRR RVEQNEDAWR NDLQTQDVPG 480
  481 LEYFEMNTIQ TATNNFSLSN KLGHGGFGSV YKARNGKLQD GREIAVKRLS SSSEQGKQEF 540
  541 MNEIVLISKL QHRNLVRVLG CCVEGTEKLL IYEFMKNKSL DTFVFVFTRC FCLDSKKRLE 600
  601 IDWPKRFDII QGIARGLLYL HRDSRLRIIH RDLKVSNILL DEKMNPKISD FGLARMFHGT 660
  661 EYQDKTRRVV GTLGYMSPEY AWAGVFSEKS DIYSFGVLLL EIISGEKISR FSYGEEGKTL 720
  721 LAYVSKSAWE CWCGARGVNL LDQALGDSCH PYEVGRCVQI GLLCVQYQPA DRPNTLELLS 780
  781 MLTTTSDLPL PKQPTFVVHT RDGKSPSNDS MITVNEMTES VIHGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle