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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BXL4_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSSPLTRR NRAPPSSVSS VYLIFLCFFL YFLNFSNAQS SPVFACDVAA NPSLAAYGFC  60
   61 NTVLKIEYRV ADLVARLTLQ EKIGFLVSKA NGVTRLGIPT YEWWSEALHG VSYIGPGTHF 120
  121 SSQVPGATSF PQVILTAASF NVSLFQAIGK VVSTEARAMY NVGLAGLTYW SPNVNIFRDP 180
  181 RWGRGQETPG EDPLLASKYA SGYVKGLQET DGGDSNRLKV AACCKHYTAY DVDNWKGVER 240
  241 YSFNAVVTQQ DMDDTYQPPF KSCVVDGNVA SVMCSYNQVN GKPTCADPDL LSGVIRGEWK 300
  301 LNGYIVSDCD SVDVLYKNQH YTKTPAEAAA ISILAGLDLN CGSFLGQHTE EAVKSGLVNE 360
  361 AAIDKAISNN FLTLMRLGFF DGNPKNQIYG GLGPTDVCTS ANQELAADAA RQGIVLLKNT 420
  421 GCLPLSPKSI KTLAVIGPNA NVTKTMIGNY EGTPCKYTTP LQGLAGTVST TYLPGCSNVA 480
  481 CAVADVAGAT KLAATADVSV LVIGADQSIE AESRDRVDLH LPGQQQELVI QVAKAAKGPV 540
  541 LLVIMSGGGF DITFAKNDPK IAGILWVGYP GEAGGIAIAD IIFGRYNPSG KLPMTWYPQS 600
  601 YVEKVPMTIM NMRPDKASGY PGRTYRFYTG ETVYAFGDGL SYTKFSHTLV KAPSLVSLGL 660
  661 EENHVCRSSE CQSLDAIGPH CENAVSGGGS AFEVHIKVRN GGDREGIHTV FLFTTPPAIH 720
  721 GSPRKHLVGF EKIRLGKREE AVVRFKVEIC KDLSVVDEIG KRKIGLGKHL LHVGDLKHSL 780
  781 SIRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle