YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP34_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSHSVEFSV LVLFLVSFLL GSTSAEKLCS DNDGDNGCFR SRVLAAQRAD RVKELPGQPP  60
   61 VKFRQYAGYV TVNETHGRAL FYWFFEATQN PSKKPVLLWL NGGPGCSSIG FGAAEELGPF 120
  121 FPQNSSQPKL KLNPYSWNKA ANLLFLESPV GVGFSYTNTS RDIKQLGDTV TARDSYNFLV 180
  181 NWFKRFPQYK SHDFYIAGES YAGHYVPQLS ELIYKENKIA SKKDFINLKG LMIGNALLDD 240
  241 ETDQKGMIEY AWDHAVISDA LYEKVNKNCD FKQKLVTKEC NDALDEYFDV YKILDMYSLY 300
  301 APKCVPTSTN SSTSHSVAGN RPLPAFRSIL RPRLISHNEG WRRMAAGYDP CASEYTEKYM 360
  361 NRKDVQEALH ANVTNISYPW THCSDTVSFW SDAPASMLPT LRTLVSAGLR VWVFSGDTDG 420
  421 RIPVTATRYS LKKLGLKIVQ DWTPWYTKLQ VGGWTVEYDG LMFVTVRGAG HQVPTFKPRE 480
  481 ALQLIHHFLG NKKLPTFPF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle